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Thomas Jefferson University overall ranking by US News is #142 out of 435 globally, for the year 2024 and for the Medicine stream, it ranks #58 out of 130 in global ranking, for the year 2024.
| Stream | 2024 Ranking | 2023 Ranking | 2022 Ranking |
| Overall | #142 out of 435 in Global Ranking | #402 out of 1740 in Global Ranking | #402 out of 1740 in Global Ranking |
| Medicine | #58 out of 130 in Global Ranking | #56 out of 124 in Global Ranking | #137 out of 999 in Global Ranking |
| Biology | - | - | #328 out of 491 in Global Ranking |
| Genetics | - | - | #201 out of 400 in Global Ranking |
| Biochemistry | - | - | #328 out of 491 in Global Ranking |
Thomas Jefferson University ranking by QS for Medicine stream is #401 out of 551 in global ranking, for the year 2024.
| Stream | 2024 Ranking | 2023 Ranking | 2020 Ranking |
| Medicine | #401 out of 551 in Global Ranking | #401 out of 520 in Global Ranking | #301 out of 600 in Global Ranking |
| Biology | #551 out of 670 in Global Ranking | - | - |
Thomas Jefferson University overall ranking by ARWU is #701 out of 1000 globally, for the year 2022 and for the Sciences stream, it ranks #201 out of 500 in global ranking, for the year 2022.
| Stream | 2022 Ranking |
| Overall | #701 out of 1000 in Global Ranking |
| Sciences | #201 out of 500 in Global Ranking |
| Medicine | #201 out of 500 in Global Ranking |
| Biology | #201 out of 500 in Global Ranking |
Thomas Jefferson University overall ranking by CWUR is #425 out of 1994 globally, for the year 2022.
| Stream | 2022 Ranking |
| Overall | #425 out of 1994 in Global Ranking |
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