For a CSE degree, ISM Dhanbad will be the better option among these. It has a higher cutoff for CSE. For 2021, the cutoff for CSE at ISM Dhanbad, IIT Bhubaneswar, and IIT Gandhinagar was 907-2968, 1621-2304, 1230-1519, respectively.
ISM Dhanbad CSE average package is INR 15 LPA. ISM is older than IIT Bhubaneswar and IIT Gandhinagar and has a large well-developed alumni base. You will get good networking opportunities.
All three institutes are new IITs formed in 2008, while the ISM is an older institute compared to the other two which became an IIT recently. According to the 2019 NIRF ranking the ISM stands at AIR 15, IIT BBS ranked 17, and IIT GN grabbed AIR 24. These institutes do not differ much in their rakings, and they are progressing well. So you need to compare these institutes based on various factors while making a choice.
So, you can choose according to your convenience by considering all the factors.